Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF29576.1 | SFF41747.1 | SAMN04488541_102431 | SAMN04488541_103247 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Peptidoglycan endopeptidase LytF. | 0.675 |
SFF29576.1 | SFF41761.1 | SAMN04488541_102431 | SAMN04488541_103248 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Peptidoglycan endopeptidase LytF. | 0.675 |
SFF41747.1 | SFF29576.1 | SAMN04488541_103247 | SAMN04488541_102431 | Peptidoglycan endopeptidase LytF. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.675 |
SFF41747.1 | SFF41761.1 | SAMN04488541_103247 | SAMN04488541_103248 | Peptidoglycan endopeptidase LytF. | Peptidoglycan endopeptidase LytF. | 0.623 |
SFF41747.1 | guaA | SAMN04488541_103247 | SAMN04488541_100380 | Peptidoglycan endopeptidase LytF. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.707 |
SFF41747.1 | guaB | SAMN04488541_103247 | SAMN04488541_10344 | Peptidoglycan endopeptidase LytF. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.632 |
SFF41761.1 | SFF29576.1 | SAMN04488541_103248 | SAMN04488541_102431 | Peptidoglycan endopeptidase LytF. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.675 |
SFF41761.1 | SFF41747.1 | SAMN04488541_103248 | SAMN04488541_103247 | Peptidoglycan endopeptidase LytF. | Peptidoglycan endopeptidase LytF. | 0.623 |
SFF41761.1 | guaA | SAMN04488541_103248 | SAMN04488541_100380 | Peptidoglycan endopeptidase LytF. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.707 |
SFF41761.1 | guaB | SAMN04488541_103248 | SAMN04488541_10344 | Peptidoglycan endopeptidase LytF. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.632 |
guaA | SFF41747.1 | SAMN04488541_100380 | SAMN04488541_103247 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Peptidoglycan endopeptidase LytF. | 0.707 |
guaA | SFF41761.1 | SAMN04488541_100380 | SAMN04488541_103248 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Peptidoglycan endopeptidase LytF. | 0.707 |
guaA | guaB | SAMN04488541_100380 | SAMN04488541_10344 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.999 |
guaB | SFF41747.1 | SAMN04488541_10344 | SAMN04488541_103247 | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Peptidoglycan endopeptidase LytF. | 0.632 |
guaB | SFF41761.1 | SAMN04488541_10344 | SAMN04488541_103248 | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Peptidoglycan endopeptidase LytF. | 0.632 |
guaB | guaA | SAMN04488541_10344 | SAMN04488541_100380 | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.999 |