Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE61726.1 | SFE74532.1 | SAMN04488541_100419 | SAMN04488541_100626 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.968 |
SFE61726.1 | SFE75076.1 | SAMN04488541_100419 | SAMN04488541_100649 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.966 |
SFE61726.1 | SFE96632.1 | SAMN04488541_100419 | SAMN04488541_101155 | Hypothetical protein. | Signal transduction histidine kinase. | 0.987 |
SFE61726.1 | SFF13295.1 | SAMN04488541_100419 | SAMN04488541_10178 | Hypothetical protein. | GAF domain-containing protein. | 0.888 |
SFE61726.1 | SFF32514.1 | SAMN04488541_100419 | SAMN04488541_10262 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.968 |
SFE61726.1 | SFF42352.1 | SAMN04488541_100419 | SAMN04488541_10338 | Hypothetical protein. | Signal transduction histidine kinase. | 0.816 |
SFE61726.1 | SFF63239.1 | SAMN04488541_100419 | SAMN04488541_10953 | Hypothetical protein. | Response regulator receiver domain-containing protein. | 0.577 |
SFE62515.1 | SFE74532.1 | SAMN04488541_100450 | SAMN04488541_100626 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | PAS domain S-box-containing protein. | 0.998 |
SFE62515.1 | SFE75076.1 | SAMN04488541_100450 | SAMN04488541_100649 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | PAS domain S-box-containing protein. | 0.998 |
SFE62515.1 | SFE96632.1 | SAMN04488541_100450 | SAMN04488541_101155 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | Signal transduction histidine kinase. | 0.993 |
SFE62515.1 | SFF13295.1 | SAMN04488541_100450 | SAMN04488541_10178 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | GAF domain-containing protein. | 0.698 |
SFE62515.1 | SFF32514.1 | SAMN04488541_100450 | SAMN04488541_10262 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | PAS domain S-box-containing protein. | 0.998 |
SFE62515.1 | SFF42352.1 | SAMN04488541_100450 | SAMN04488541_10338 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | Signal transduction histidine kinase. | 0.804 |
SFE62515.1 | SFF63239.1 | SAMN04488541_100450 | SAMN04488541_10953 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | Response regulator receiver domain-containing protein. | 0.959 |
SFE74532.1 | SFE61726.1 | SAMN04488541_100626 | SAMN04488541_100419 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.968 |
SFE74532.1 | SFE62515.1 | SAMN04488541_100626 | SAMN04488541_100450 | PAS domain S-box-containing protein. | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | 0.998 |
SFE74532.1 | SFE75076.1 | SAMN04488541_100626 | SAMN04488541_100649 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SFE74532.1 | SFE87942.1 | SAMN04488541_100626 | SAMN04488541_10094 | PAS domain S-box-containing protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.998 |
SFE74532.1 | SFE96632.1 | SAMN04488541_100626 | SAMN04488541_101155 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
SFE74532.1 | SFF13295.1 | SAMN04488541_100626 | SAMN04488541_10178 | PAS domain S-box-containing protein. | GAF domain-containing protein. | 0.998 |
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