STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF44480.1Pimeloyl-ACP methyl ester carboxylesterase. (253 aa)    
Predicted Functional Partners:
SFF44467.1
CBS domain-containing protein.
    
  0.802
SFF55487.1
GH3 auxin-responsive promoter.
  
     0.755
SFE67997.1
3-oxoacid CoA-transferase subunit B.
  
 
 0.734
SFF29576.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
  0.697
SFE79509.1
Chorismate mutase.
     
 0.683
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
   
  0.681
SFF42501.1
NADPH:quinone reductase.
  
  0.595
SFF11052.1
Protein of unknown function.
  
     0.584
SFF06015.1
Pyruvate/2-oxoglutarate/acetoin dehydrogenase complex, dehydrogenase (E1) component.
  
 
  0.574
SFF35132.1
2-oxoisovalerate dehydrogenase E1 component.
  
 
  0.573
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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