STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF45581.1Hypothetical protein. (277 aa)    
Predicted Functional Partners:
SFF18983.1
Helix-hairpin-helix motif-containing protein.
 
     0.779
SFE67221.1
Ig-like domain-containing protein.
  
     0.763
SFF55476.1
Hypothetical protein.
  
     0.710
SFF06572.1
FlgD Ig-like domain-containing protein.
  
     0.675
SFE90309.1
Glycosyltransferase involved in cell wall bisynthesis.
  
  
  0.659
SFE99938.1
Outer membrane translocation and assembly module TamA.
  
     0.641
SFE40109.1
Hypothetical protein.
  
     0.632
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
       0.628
SFF51437.1
Antitoxin component YwqK of the YwqJK toxin-antitoxin module.
  
     0.619
SFF13367.1
Hypothetical protein.
  
     0.563
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.