STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF49575.1Esterase/lipase superfamily enzyme. (242 aa)    
Predicted Functional Partners:
SFF16735.1
Glutathione synthase/RimK-type ligase, ATP-grasp superfamily.
 
     0.790
SFF30137.1
Hypothetical protein.
 
     0.778
SFE99396.1
ATP-grasp domain-containing protein.
 
     0.777
SFE75727.1
GMP synthase-Glutamine amidotransferase.
 
     0.775
SFF43989.1
Predicted hydrolase of the alpha/beta superfamily.
 
     0.750
SFF49586.1
Inosose dehydratase.
       0.732
SFF40102.1
Enterochelin esterase.
 
     0.726
SFF49563.1
Hypothetical protein.
       0.434
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.