STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF55881.1Capsular exopolysaccharide family. (785 aa)    
Predicted Functional Partners:
SFE86312.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.999
SFF23565.1
Polysaccharide export outer membrane protein.
 
 0.999
SFF55871.1
Protein involved in gliding motility EpsA.
 0.999
SFF23525.1
Tyrosine-protein phosphatase YwqE.
  
 0.857
SFE86222.1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Belongs to the glycosyltransferase 26 family.
 
  
 0.843
SFF23543.1
Capsular exopolysaccharide family.
 
 
0.827
SFF41238.1
UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.799
SFF28346.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
  
 
 0.793
SFE48662.1
Acyl-protein synthetase, LuxE.
    
  0.712
SFF25563.1
GH3 auxin-responsive promoter.
    
  0.712
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.