STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF59215.1Protein of unknown function. (171 aa)    
Predicted Functional Partners:
SFF40567.1
N-acetylglucosaminyl deacetylase, LmbE family.
  
     0.737
SFE50462.1
Transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.706
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.679
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
     0.610
SFF23004.1
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA.
  
     0.525
SFF11052.1
Protein of unknown function.
  
     0.508
SFF27110.1
Hypothetical protein.
  
     0.498
SFE88743.1
Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family.
  
     0.477
SFE63804.1
Uncharacterized damage-inducible protein DinB (forms a four-helix bundle).
  
     0.441
SFF59232.1
Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase.
       0.440
Your Current Organism:
Thermoflexibacter ruber
NCBI taxonomy Id: 1003
Other names: ATCC 23103, DSM 9560, Flexibacter ruber, IFO 16677, LMG 13857, LMG:13857, NBRC 16677, T. ruber, strain GEY
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.