STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW92404.1Transcriptional regulator, TetR family protein. (223 aa)    
Predicted Functional Partners:
AEW92405.1
Hypothetical protein.
 
     0.862
AEW92403.1
Hypothetical protein.
 
     0.813
AEW96503.1
Hypothetical protein.
  
     0.480
AEW93641.1
Transcriptional regulator.
  
   
 0.473
AEW95598.1
Hypothetical protein.
  
     0.465
AEW96150.1
Hypothetical protein.
  
     0.465
AEW95597.1
Hypothetical protein.
  
     0.448
AEW96847.1
Putative acetyltransferase.
  
    0.433
AEW95822.1
MaoC domain protein dehydratase.
  
     0.426
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.