STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW92427.1Transcriptional regulator, GntR family. (216 aa)    
Predicted Functional Partners:
AEW92428.1
Hypothetical protein.
       0.780
AEW96978.1
GntR family transcriptional regulator.
  
     0.725
AEW96792.1
GntR family transcriptional regulator.
  
     0.713
AEW92594.1
GntR family transcriptional regulator.
  
     0.623
AEW93378.1
GntR domain protein.
 
  
 0.553
AEW94415.1
Hypothetical protein.
  
     0.500
AEW92429.1
Hypothetical protein.
       0.469
AEW94407.1
PEP phosphonomutase-like protein.
 
  
 0.463
AEW93804.1
Hypothetical protein.
  
     0.462
AEW93261.1
GntR-family transcriptional regulator.
 
  
 0.459
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.