STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylAXylose isomerase; Belongs to the xylose isomerase family. (391 aa)    
Predicted Functional Partners:
xylB
Xylulose kinase.
 
 
 0.998
AEW93904.1
Carbohydrate kinase FGGY; Belongs to the FGGY kinase family.
 
 
 0.987
AEW94383.1
PTS system, fructose-specific IIABC components.
   
 
 0.969
AEW94943.1
Fructokinase.
 
  
 0.924
AEW92474.1
Xylose repressor.
 
   
 0.879
AEW93181.1
Transcriptional regulator.
    
 0.820
AEW93625.1
Glucokinase.
    
 0.820
AEW94811.1
ROK family protein.
    
 0.820
AEW97170.1
Sugar kinase.
    
 0.820
AEW97038.1
Solute-binding protein.
 
  
 0.652
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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