STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW92566.1Delta-6 fatty acid desaturase. (346 aa)    
Predicted Functional Partners:
AEW97189.1
Oxidoreductase.
  
  
 0.802
AEW92565.1
Putative type I polyketide synthase.
  
 
 0.685
AEW97329.1
Hypothetical protein.
       0.561
AEW95434.1
Phenylacetic acid degradation NADH oxidoreductase.
  
  
 0.480
AEW98134.1
Polyketide synthase.
  
 
 0.461
AEW95939.1
Putative hybrid non-ribosomal peptide synthetase/polyketide synthase.
  
 
 0.444
AEW94490.1
Fatty acid desaturase (membrane).
  
 
 0.432
AEW92567.1
Hypothetical protein.
       0.429
AEW95211.1
Putative secreted protein.
 
   
 0.417
AEW93390.1
Fatty acid hydroxylase.
  
  
 0.406
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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