STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW92815.1PlmR5. (957 aa)    
Predicted Functional Partners:
AEW96886.1
Two-component system sensor kinase.
  
 
 0.837
AEW92816.1
PlmR4.
 
    
0.794
AEW95173.1
Hypothetical protein.
  
     0.537
AEW92814.1
Cell division protein FtsK/SpoIIIE.
 
     0.518
AEW97205.1
Hypothetical protein.
 
 
 0.475
AEW93003.1
Hypothetical protein.
  
     0.436
AEW92812.1
Protein of unknown function DUF690.
 
     0.435
AEW97804.1
Endonuclease III-like protein.
  
     0.419
AEW97370.1
Hypothetical protein.
  
     0.417
AEW95611.1
Hypothetical protein.
  
   0.407
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.