STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW93209.1Putative integral membrane protein. (233 aa)    
Predicted Functional Partners:
AEW93207.1
Putative integral membrane protein.
       0.747
AEW95970.1
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center.
   
 0.701
AEW93208.1
Putative integral membrane protein.
     
 0.645
AEW92675.1
Integral membrane protein.
   
   0.596
AEW93199.1
Acetyltransferase.
       0.561
AEW93212.1
TetR family transcriptional regulator.
       0.561
AEW97985.1
Transcriptional regulator, MarR family.
       0.561
AEW97986.1
Integral membrane protein.
       0.561
AEW92530.1
Hypothetical protein.
    
  0.506
AEW93210.1
Hypothetical protein.
       0.506
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.