STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW93254.1Flavoprotein oxidoreductase. (455 aa)    
Predicted Functional Partners:
AEW95434.1
Phenylacetic acid degradation NADH oxidoreductase.
  
 
 0.755
AEW97189.1
Oxidoreductase.
  
 
 0.755
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
   
    0.695
AEW97741.1
Riboflavin synthase subunit alpha.
   
    0.695
rpmJ
Ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.607
AEW93407.1
FAD dependent oxidoreductase.
  
 
 0.599
AEW93599.1
Glycine oxidase.
  
 
 0.599
AEW94273.1
Putative oxidoreductase.
  
 
 0.599
AEW95268.1
D-amino acid oxidase.
  
 
 0.599
AEW96514.1
D-amino acid oxidase.
  
 
 0.599
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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