STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW93264.1Oxidoreductase. (255 aa)    
Predicted Functional Partners:
AEW93768.1
UfaA2 protein.
 
 0.753
AEW93395.1
Oxidoreductase.
  
     0.724
AEW93265.1
Mandelate racemase/muconate lactonizing protein.
  
  
 0.624
AEW93267.1
acyl-CoA dehydrogenase domain protein.
  
  0.618
AEW93266.1
Putative phosphotransferase.
  
   0.575
AEW95634.1
Non-ribosomal peptide synthetase.
  
 
 0.553
AEW95946.1
Putative acyltransferase.
  
 
 0.526
AEW93863.1
Putative malonyl-CoA acyl carrier protein (ACP) transferase.
  
 
 0.525
AEW95653.1
Modular polyketide synthase.
 
 
 0.501
AEW92565.1
Putative type I polyketide synthase.
  
 
 0.446
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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