STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW93506.1Two-component system response regulator. (219 aa)    
Predicted Functional Partners:
AEW96458.1
Two-component system sensor kinase.
   
 0.866
AEW93496.1
30S ribosomal protein S1.
  
    0.747
AEW93507.1
Hypothetical protein.
       0.746
AEW94745.1
Lipoprotein.
  
 
 0.697
AEW97075.1
Hypothetical protein.
  
 
 0.697
AEW97923.1
ABC transporter, substrate binding protein.
  
 
 0.697
AEW95460.1
Hypothetical protein.
      
 0.674
AEW93852.1
Hypothetical protein.
   
    0.660
atpD
F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
    0.656
AEW93521.1
Glutamate synthase (ferredoxin).
  
  
 0.638
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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