STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW93642.1Putative aminotransferase. (494 aa)    
Predicted Functional Partners:
AEW93448.1
Hypothetical protein.
 
 
 0.970
AEW93450.1
ABC transporter ATP-binding protein.
 
  
 0.946
AEW93453.1
Hypothetical protein.
 
 
 0.922
AEW93452.1
Hypothetical protein.
 
 
 0.913
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).
       0.721
AEW93644.1
Cytochrome B subunit.
     
 0.692
AEW93645.1
Ubiquinol-cytochrome c reductase iron-sulfur 'Rieske' subunit.
       0.670
AEW93646.1
Cytochrome C heme-binding subunit.
       0.670
AEW93647.1
Cytochrome c oxidase subunit III.
  
    0.653
AEW93648.1
Two-component system response regulator.
  
    0.627
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.