STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW93750.1Putative RNA helicase. (2241 aa)    
Predicted Functional Partners:
AEW93751.1
Putative helicase.
 
   
 0.970
AEW93749.1
Hypothetical protein.
 
     0.955
AEW95137.1
XRE family transcriptional regulator.
 
     0.727
AEW95136.1
Integrase family protein.
  
     0.701
AEW94391.1
Hypothetical protein.
      
 0.526
AEW97781.1
Putative clavaminate synthase-like (oxidase).
  
     0.502
AEW97214.1
Hypothetical protein.
 
     0.485
AEW94913.1
Hydrolase.
  
     0.461
AEW93738.1
Integrase.
  
     0.453
AEW95044.1
Oxygenase (secreted protein).
  
     0.429
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.