STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW94208.1LacI family transcriptional regulator. (408 aa)    
Predicted Functional Partners:
AEW93521.1
Glutamate synthase (ferredoxin).
    
 
 0.903
AEW94209.1
Hypothetical protein.
  
  
 0.812
AEW94210.1
Oxidoreductase.
 
   
 0.791
AEW95553.1
LacI family transcriptional regulator.
  
     0.773
AEW96979.1
Phosphocarrier protein HPr.
 
 
 
 0.685
AEW94206.1
Hypothetical protein.
  
  
 0.577
AEW94207.1
Hypothetical protein.
     
 0.563
AEW94383.1
PTS system, fructose-specific IIABC components.
     
 0.520
AEW96886.1
Two-component system sensor kinase.
    
 
 0.505
xylB
Xylulose kinase.
 
 
 
 0.494
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.