STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW94578.1gntR-family regulator. (254 aa)    
Predicted Functional Partners:
AEW93289.1
gntR-family transcriptional regulator.
  
     0.768
AEW92751.1
GntR family transcriptional regulator.
  
     0.766
AEW94576.1
Hypothetical protein.
       0.542
AEW97324.1
Regulatory protein.
 
  
 0.509
AEW94577.1
Hypothetical protein.
  
    0.458
AEW93858.1
Transcriptional regulator, MerR family.
  
    0.451
AEW94812.1
Putative N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.413
AEW93378.1
GntR domain protein.
  
   
0.402
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.