Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEW93333.1 | AEW94780.1 | SCATT_09620 | SCATT_24090 | Prephenate dehydrogenase. | Cold shock protein. | 0.786 |
| AEW94780.1 | AEW93333.1 | SCATT_24090 | SCATT_09620 | Cold shock protein. | Prephenate dehydrogenase. | 0.786 |
| AEW94780.1 | AEW94781.1 | SCATT_24090 | SCATT_24100 | Cold shock protein. | Hypothetical protein. | 0.758 |
| AEW94780.1 | AEW95487.1 | SCATT_24090 | SCATT_31160 | Cold shock protein. | Jag-like protein. | 0.588 |
| AEW94780.1 | rplV | SCATT_24090 | SCATT_35890 | Cold shock protein. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.649 |
| AEW94780.1 | rpmE | SCATT_24090 | SCATT_41690 | Cold shock protein. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.468 |
| AEW94780.1 | rpoA | SCATT_24090 | SCATT_36120 | Cold shock protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.589 |
| AEW94780.1 | rpoB | SCATT_24090 | SCATT_35560 | Cold shock protein. | Nos5; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.609 |
| AEW94780.1 | rpoZ | SCATT_24090 | SCATT_53440 | Cold shock protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.677 |
| AEW94780.1 | rpsL | SCATT_24090 | SCATT_35580 | Cold shock protein. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.510 |
| AEW94780.1 | rpsO | SCATT_24090 | SCATT_45030 | Cold shock protein. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.554 |
| AEW94781.1 | AEW94780.1 | SCATT_24100 | SCATT_24090 | Hypothetical protein. | Cold shock protein. | 0.758 |
| AEW95487.1 | AEW94780.1 | SCATT_31160 | SCATT_24090 | Jag-like protein. | Cold shock protein. | 0.588 |
| AEW95487.1 | rplV | SCATT_31160 | SCATT_35890 | Jag-like protein. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.787 |
| rplV | AEW94780.1 | SCATT_35890 | SCATT_24090 | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | Cold shock protein. | 0.649 |
| rplV | AEW95487.1 | SCATT_35890 | SCATT_31160 | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | Jag-like protein. | 0.787 |
| rplV | rpmE | SCATT_35890 | SCATT_41690 | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.967 |
| rplV | rpoA | SCATT_35890 | SCATT_36120 | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.982 |
| rplV | rpoB | SCATT_35890 | SCATT_35560 | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | Nos5; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.991 |
| rplV | rpoZ | SCATT_35890 | SCATT_53440 | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.927 |
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