STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW95327.1Hypothetical protein. (180 aa)    
Predicted Functional Partners:
tadA
Cytidine/deoxycytidine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
       0.820
AEW95221.1
Anti-sigma factor.
  
     0.763
AEW95329.1
Hypothetical protein.
       0.705
AEW95331.1
RNA polymerase sigma factor, sigma F; Belongs to the sigma-70 factor family.
 
     0.691
AEW93548.1
Putative ABC transporter integral membrane subunit.
  
     0.682
AEW95332.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family.
 
     0.680
AEW95986.1
Hypothetical protein.
  
     0.677
AEW96320.1
Hypothetical protein.
  
     0.633
AEW96885.1
Regulatory protein.
  
     0.633
AEW96373.1
Hypothetical protein.
  
     0.616
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.