STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW95496.1RNA polymerase sigma factor SigM; Belongs to the sigma-70 factor family. ECF subfamily. (244 aa)    
Predicted Functional Partners:
AEW95495.1
Hypothetical protein.
  
 
 0.917
AEW95497.1
Hypothetical protein.
   
 
 0.832
AEW95494.1
Thioredoxin reductase.
     
 0.782
AEW96022.1
RNA polymerase, sigma 32 subunit, RpoH; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.769
AEW92863.1
ECF subfamily RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.766
AEW96121.1
ECF sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.765
AEW93719.1
RNA polymerase sigma factor SigL; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.761
AEW95356.1
RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily.
  
   
 0.726
AEW95493.1
Thioredoxin; Belongs to the thioredoxin family.
     
 0.539
AEW95499.1
Hypothetical protein.
   
   0.536
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.