STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW95538.1HTH-type transcriptional regulator araB; Belongs to the LysR transcriptional regulatory family. (294 aa)    
Predicted Functional Partners:
AEW95537.1
Putative NUDIX hydrolase.
       0.774
AEW95539.1
Cystathionine gamma-lyase.
  
  
 0.754
AEW96996.1
Two-component system sensor kinase.
  
  
 0.738
AEW95540.1
Membrane spanning protein.
 
     0.721
AEW93258.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.708
AEW96018.1
Putative LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.693
AEW94211.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.691
AEW98126.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.685
AEW94878.1
LysR family regulatory protein; Belongs to the LysR transcriptional regulatory family.
  
     0.684
AEW95541.1
Hypothetical protein.
  
    0.656
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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