STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW95566.1Putative ABC transporter ATP-binding protein. (331 aa)    
Predicted Functional Partners:
AEW95567.1
Integral membrane protein.
 
 
 0.981
AEW95569.1
Integral membrane protein.
 
 
 0.970
AEW95568.1
Putative ABC transporter ATP-binding protein.
 
   
0.902
AEW95564.1
Short chain dehydrogenase.
  
 
 0.705
AEW95563.1
Hypothetical protein.
       0.668
AEW95558.1
Putative hydrolase.
 
   0.657
AEW95561.1
Hypothetical protein.
       0.628
AEW95560.1
Hypothetical protein.
       0.561
AEW96750.1
Hypothetical protein.
  
     0.551
AEW93786.1
ABC transporter ATP-binding protein, AmfA.
 
 0.533
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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