STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW96079.1GMC family oxidoreductase. (520 aa)    
Predicted Functional Partners:
AEW96082.1
Glycine betaine-binding lipoprotein.
 
   
 0.913
AEW96081.1
Glycine betaine ABC transporter integral membrane protein.
 
  
 0.901
AEW93646.1
Cytochrome C heme-binding subunit.
  
 
 0.900
AEW96080.1
Putative glycine betaine ABC transporter ATP-binding protein.
 
  
 0.847
AEW96078.1
Putative betaine aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.782
AEW93697.1
Penicillin-binding protein.
    
 0.744
AEW93132.1
Putative serine/threonine-protein kinase.
    
 0.731
AEW93404.1
Hypothetical protein.
    
 0.731
AEW93442.1
Hypothetical protein.
    
 0.731
AEW96083.1
Transcriptional regulator, AraC family.
     
 0.682
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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