STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW96225.1D-amino acid deaminase. (412 aa)    
Predicted Functional Partners:
AEW96224.1
D-aminoacylase.
 
   
 0.936
AEW96228.1
Hypothetical protein.
 
   
 0.837
AEW92477.1
Thiamine pyrophosphate protein domain protein TPP-binding protein; Belongs to the TPP enzyme family.
  
    0.813
AEW97260.1
Thiamine pyrophosphate protein; Belongs to the TPP enzyme family.
  
    0.813
AEW96227.1
IclR family transcriptional regulator.
  
    0.790
AEW96226.1
PfkB domain protein.
 
     0.711
AEW94699.1
D-aminoacylase.
 
   
 0.611
AEW96223.1
Aspartate aminotransferase.
       0.561
AEW96229.1
Gluconate transporter.
  
    0.491
AEW98033.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein.
   
    0.432
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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