STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW96446.1Protein of unknown function DUF347. (269 aa)    
Predicted Functional Partners:
def-2
Putative polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
       0.608
AEW97266.1
Putative acid phosphatase.
 
     0.592
AEW97617.1
FMN-binding domain-containing protein.
  
     0.511
AEW93260.1
High-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.506
AEW96444.1
Hypothetical protein.
       0.470
AEW93533.1
Protease-like protein.
  
     0.466
AEW97460.1
High-affinity nickel-transport protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.460
AEW97360.1
Neutral zinc metalloprotease.
  
     0.449
AEW93992.1
Serine protease.
  
     0.446
AEW97774.1
Serine protease.
  
     0.446
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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