STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEW96811.1DNA protecting protein DprA. (451 aa)    
Predicted Functional Partners:
AEW96810.1
Magnesium chelatase.
 
 0.908
AEW93987.1
ComEC/Rec2-related protein.
 
  
 0.854
AEW94375.1
Hypothetical protein.
 
 
 0.847
AEW96248.1
Peptidase A24A prepilin type IV.
  
  
 0.797
AEW96812.1
RNA polymerase sigma factor WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
    0.732
rimM
16S rRNA-processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.
     
 0.727
AEW96809.1
Protein of unknown function UPF0102; Belongs to the UPF0102 family.
 
    0.725
AEW98081.1
Extracellular aminoglycoside phosphate phosphatase; Belongs to the alkaline phosphatase family.
  
    0.725
AEW96692.1
Putative integral membrane phosphodiesterase.
  
    0.699
AEW96813.1
Transcriptional regulator.
  
    0.695
Your Current Organism:
Streptomyces cattleya
NCBI taxonomy Id: 1003195
Other names: S. cattleya NRRL 8057 = DSM 46488, Streptomyces cattleya DSM 46488, Streptomyces cattleya DSM 46488 = NRRL 8057, Streptomyces cattleya JCM 4925, Streptomyces cattleya NBRC 14057, Streptomyces cattleya NRRL 8057, Streptomyces cattleya NRRL 8057 = DSM 46488
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.