STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE54934.1BolA-like protein; COG0271 Stress-induced morphogen (activity unknown). (80 aa)    
Predicted Functional Partners:
AFE55405.1
COG0278 Glutaredoxin-related protein.
  
 0.942
AFE54933.1
Hypothetical protein.
       0.790
AFE54814.1
ATP-binding protein Mrp; COG0489 ATPases involved in ChromosomeRTP9991CWPP partitioning.
     
 0.695
AFE54935.1
Hypothetical protein; COG2200 FOG: EAL domain.
       0.566
acpP
COG0236 Acyl carrier protein.
   
  0.489
AFE54890.1
COG0633 Ferredoxin.
   
 
 0.485
AFE55166.1
Scaffold protein; COG0822 NifU homolog involved in Fe-S cluster formation.
     
 0.478
cyaY
COG1965 Protein implicated in iron transport, frataxin homolog.
     
 0.460
Your Current Organism:
Rickettsia typhi
NCBI taxonomy Id: 1003202
Other names: R. typhi str. B9991CWPP, Rickettsia typhi B9991CWPP, Rickettsia typhi str. B9991CWPP, Rickettsia typhi strain B9991CWPP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.