STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE55076.1COG2917 Intracellular septation protein A. (180 aa)    
Predicted Functional Partners:
AFE55077.1
Hypothetical protein; COG0672 High-affinity Fe2+/Pb2+ permease.
 
     0.737
AFE55078.1
Hypothetical protein.
       0.691
AFE55074.1
Rare lipoprotein A precursor; COG0797 Lipoproteins.
       0.497
AFE55075.1
COG2823 Predicted periplasmic or secreted lipoprotein.
       0.457
AFE55084.1
COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
 
     0.414
Your Current Organism:
Rickettsia typhi
NCBI taxonomy Id: 1003202
Other names: R. typhi str. B9991CWPP, Rickettsia typhi B9991CWPP, Rickettsia typhi str. B9991CWPP, Rickettsia typhi strain B9991CWPP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.