STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAB1_0736Putative ABC transporter permease component. (610 aa)    
Predicted Functional Partners:
fbpC2
ABC transporter, ATP-binding component.
 
 0.999
glnP
ABC transporter, membrane permease.
 
 
 0.925
artJ
Membrane transport protein, solute binding component.
 
  
 0.891
artM
ABC transporter, ATP-binding component.
 
 
 0.887
appA
Putative transport protein; Overlaps CDS with the same product name.
  
 
 0.864
fliY
Putative transport lipoprotein.
    
 0.853
oppC_1_1
Putative peptide ABC transport system permease protein.
    
 0.848
CAB1_0438
ABC transporter, ATP-binding component.
 
 
 0.830
CAB1_0753
Putative membrane protein.
  
  
  0.813
CAB1_0210
Putative ATP-binding ABC transport protein.
  
 
 0.808
Your Current Organism:
Chlamydia abortus
NCBI taxonomy Id: 1003238
Other names: C. abortus LLG, Chlamydia abortus LLG, Chlamydophila abortus LLG
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.