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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rad21Double-strand-break repair protein rad21 homolog. (631 aa)    
Predicted Functional Partners:
Stag1
Cohesin subunit SA-1.
   
 0.999
Stag2
Cohesin subunit SA-2 isoform X1.
   
 0.999
Smc3
Structural maintenance of chromosomes protein.
   
 0.999
Smc1a
Structural maintenance of chromosomes protein.
   
 0.999
Smc1b
Structural maintenance of chromosomes protein 1B.
   
 0.996
Nipbl
Nipped-B protein.
   
 0.990
Wapl
Wings apart-like protein homolog.
    
 0.982
Pds5a
Sister chromatid cohesion protein PDS5 homolog A isoform X1.
   
 0.981
Pds5b
Sister chromatid cohesion protein PDS5 homolog B isoform X1.
   
 0.976
Espl1
Separin.
   
 0.972
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.