STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Clcn1Chloride channel protein. (992 aa)    
Predicted Functional Partners:
Ostm1
Osteopetrosis-associated transmembrane protein 1.
   
 0.790
Bsnd
Barttin.
   
 
 0.703
Gpr153
Probable G-protein coupled receptor 153 isoform X1.
      
 0.674
Lats1
Serine/threonine-protein kinase LATS1.
    
 0.640
Lats2
Non-specific serine/threonine protein kinase.
    
 0.640
Scn4a
Sodium channel protein; Mediates the voltage-dependent sodium ion permeability of excitable membranes. Assuming opened or closed conformations in response to the voltage difference across the membrane, the protein forms a sodium-selective channel through which Na(+) ions may pass in accordance with their electrochemical gradient.
   
  
 0.636
Invs
Inversin isoform X2.
    
 
 0.632
Mbnl1
Muscleblind-like protein 1 isoform X2.
      
 0.584
Celf1
CUGBP Elav-like family member 1 isoform X6.
      
 0.581
Crbn
Protein cereblon isoform X2.
    
 
 0.575
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.