STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pcdh9Protocadherin-9 isoform X1. (1237 aa)    
Predicted Functional Partners:
Tmem145
Transmembrane protein 145.
   
  
 0.617
Timd4
T-cell immunoglobulin and mucin domain-containing protein 4 isoform X1.
    
 0.614
St6gal2
Beta-galactoside alpha-2,6-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
   
  
 0.612
Atxn2
Ataxin-2 isoform X2.
      
 0.611
Tmem231
Transmembrane protein 231.
      
 0.611
Tmem26
Transmembrane protein 26.
      
 0.611
Ppp1r10
Serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X1.
     
 0.605
Setd4
SET domain-containing protein 4 isoform X2.
      
 0.602
Slc5a7
High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.602
Cask
Peripheral plasma membrane protein CASK isoform X4; Belongs to the MAGUK family.
    
 0.600
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.