STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ClasrpCLK4-associating serine/arginine rich protein. (664 aa)    
Predicted Functional Partners:
Ccnl1
cyclin-L1 isoform X1; Belongs to the cyclin family.
   
  
 0.614
Phldb2
Pleckstrin homology-like domain family B member 2 isoform X3.
      
 0.601
Gabpb2
GA-binding protein subunit beta-2.
      
 0.600
Clip1
CAP-Gly domain-containing linker protein 1.
      
 0.598
Clip2
CAP-Gly domain-containing linker protein 2.
      
 0.598
Clasp2
CLIP-associating protein 2 isoform X19.
      
 0.593
Clasp1
CLIP-associating protein 1 isoform X9.
      
 0.593
Gcc2
GRIP and coiled-coil domain-containing protein 2.
      
 0.591
Mrpl51
39S ribosomal protein L51, mitochondrial.
      
 0.569
Cirbp
Cold-inducible RNA-binding protein isoform X2.
      
 0.567
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.