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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fam126aHyccin isoform X1. (521 aa)    
Predicted Functional Partners:
Ttc7b
Tetratricopeptide repeat protein 7B isoform X2.
    
 
 0.971
Pi4ka
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
    
 
 0.952
Ttc7
Tetratricopeptide repeat protein 7A.
    
 
 0.873
Il1rapl2
X-linked interleukin-1 receptor accessory protein-like 2.
      
 0.589
Aimp1
Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform X1.
      
 0.569
Phka2
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I.
      
 0.565
Gjc2
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.562
Tmem150a
Transmembrane protein 150A.
      
 0.561
Tmem109
Transmembrane protein 109.
      
 0.560
Zcchc24
Zinc finger CCHC domain-containing protein 24.
      
 0.551
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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