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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Alkbh7Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial. (221 aa)    
Predicted Functional Partners:
Ndufb7
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7.
   
    0.760
Fto
Alpha-ketoglutarate-dependent dioxygenase FTO.
     
 0.729
Mrps34
28S ribosomal protein S34, mitochondrial.
   
    0.689
Ndufs8
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial isoform X1.
   
    0.687
Ssx2ip
Afadin- and alpha-actinin-binding protein.
 
   
  0.681
Alkbh6
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1.
   
  
 0.629
Alkbh4
Alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 isoform X2.
   
  
 0.623
Afdn
Afadin.
    
  0.604
LOC101844635
Afadin-like.
    
  0.604
Ndufa13
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13.
   
    0.599
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.