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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ccr5C-C chemokine receptor type 5 isoform X2; Belongs to the G-protein coupled receptor 1 family. (354 aa)    
Predicted Functional Partners:
Ccl2
C-C motif chemokine.
   
 0.990
Ccl4
C-C motif chemokine.
   
 0.976
Ccl3
C-C motif chemokine.
   
 0.968
Cxcl10
C-X-C motif chemokine.
   
 0.959
Cxcl12
Stromal cell-derived factor 1 isoform X1.
    
 0.949
Ccl17
C-C motif chemokine.
    
 0.947
Cxcr4
C-X-C chemokine receptor type 4 isoform X1; Belongs to the G-protein coupled receptor 1 family.
    
0.943
Ccl11
C-C motif chemokine.
    
 0.931
Ccl22
C-C motif chemokine.
    
 0.930
Gngt1
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.926
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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