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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mtmr9Myotubularin-related protein 9. (546 aa)    
Predicted Functional Partners:
Mtmr6
Myotubularin-related protein 6.
  
0.981
Mtmr7
Myotubularin-related protein 7 isoform X1.
  
0.967
Mtmr4
Myotubularin-related protein 4 isoform X1.
 
 
 0.847
Emilin1
EMILIN-1.
    
   0.760
LOC101825986
Myotubularin-related protein 4.
 
  
  0.758
Pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.714
Mtmr3
Myotubularin-related protein 3.
 
 
 0.694
Lrguk
Leucine-rich repeat and guanylate kinase domain-containing protein isoform X4.
    
   0.686
Tdh
L-threonine 3-dehydrogenase, mitochondrial.
 
   
  0.684
Ccm2
Cerebral cavernous malformations 2 protein.
   
 
 0.670
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.