STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ehbp1EH domain-binding protein 1 isoform X2. (1216 aa)    
Predicted Functional Partners:
Rab8a
Ras-related protein Rab-8A.
    
 0.963
Magi3
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 isoform X2.
   
 0.866
Rab8b
Ras-related protein Rab-8B.
    
 0.819
Rab10
Ras-related protein Rab-10.
    
 0.779
Cask
Peripheral plasma membrane protein CASK isoform X4; Belongs to the MAGUK family.
   
  0.758
Itsn2
Intersectin-2.
     
 0.720
Ehd2
EH domain-containing protein 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.680
Capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.676
Tpm4
Tropomyosin alpha-4 chain isoform X2; Belongs to the tropomyosin family.
   
 0.671
Tpm3
Tropomyosin alpha-3 chain isoform X1; Belongs to the tropomyosin family.
   
 0.671
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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