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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1018291882'-5'-oligoadenylate synthase-like protein 2. (101 aa)    
Predicted Functional Partners:
Ube2v1
LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 variant 1-like.
   
 0.998
Mysm1
Histone H2A deubiquitinase MYSM1 isoform X1.
    
 0.994
Ubxn7
UBX domain-containing protein 7.
    
 0.992
Fancm
Fanconi anemia group M protein.
   
 0.986
Nbr1
Next to BRCA1 gene 1 protein.
   
 0.976
Traf7
E3 ubiquitin-protein ligase TRAF7 isoform X2.
    
 0.959
LOC101838958
E3 ubiquitin-protein ligase TRIP12.
   
 0.944
ENSMAUP00000004375
annotation not available
   
 0.944
Rabgef1
Rab5 GDP/GTP exchange factor isoform X1.
    
 0.942
Usp18
Ubl carboxyl-terminal hydrolase 18; Belongs to the peptidase C19 family.
   
 0.941
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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