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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Krt24Keratin, type I cytoskeletal 24; Belongs to the intermediate filament family. (520 aa)    
Predicted Functional Partners:
Unc79
Protein unc-79 homolog isoform X6.
    
 0.850
Ranbp2
E3 SUMO-protein ligase RanBP2.
    
 0.714
Rims2
Regulating synaptic membrane exocytosis protein 2.
    
  0.693
Krt8
Keratin, type II cytoskeletal 8; Belongs to the intermediate filament family.
   
0.687
Kdm6a
Lysine-specific demethylase 6A.
    
 0.684
Kdm6b
Lysine-specific demethylase 6B isoform X4.
    
 0.684
Rbbp5
Retinoblastoma-binding protein 5.
    
 0.684
Ash2l
set1/Ash2 histone methyltransferase complex subunit ASH2.
    
 0.682
Nup107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.664
Tep1
Telomerase protein component 1.
    
 0.660
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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