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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ppp1ccProtein phosphatase 1 catalytic subunit gamma. (216 aa)    
Predicted Functional Partners:
Itsn2
Intersectin-2.
    
 0.983
Wdr82
WD repeat-containing protein 82.
    
 0.980
Cpsf1
Cleavage and polyadenylation specificity factor subunit 1.
    
 0.973
Shoc2
Leucine-rich repeat protein SHOC-2.
    
 0.970
Ppp1r3a
Protein phosphatase 1 regulatory subunit 3A.
    
 0.970
Cpsf3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.967
Cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.965
Wdr33
pre-mRNA 3' end processing protein WDR33 isoform X1.
   
 0.965
Mras
Ras-related protein M-Ras.
    
 0.964
Rb1
Retinoblastoma-associated protein.
   
 0.964
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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