STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sytl4Synaptotagmin-like protein 4 isoform X1. (668 aa)    
Predicted Functional Partners:
Rab27a
Ras-related protein Rab-27A.
   
 
 0.939
Rab3a
Ras-related protein Rab-3A.
   
 0.896
Stxbp1
Syntaxin-binding protein 1 isoform X1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.876
Rab8a
Ras-related protein Rab-8A.
    
 
 0.875
Stxbp2
Syntaxin-binding protein 2 isoform X1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.761
Stx3
Syntaxin-3 isoform X1; Belongs to the syntaxin family.
    
 0.744
Rab27b
Ras-related protein Rab-27B.
   
 
 0.743
Rab3c
Ras-related protein Rab-3C isoform X1.
   
 0.740
Rab3b
Ras-related protein Rab-3B; Protein transport. Probably involved in vesicular traffic (By similarity); Belongs to the small GTPase superfamily. Rab family.
   
 0.740
Stx1a
syntaxin-1A isoform X1; Belongs to the syntaxin family.
    
 0.728
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.