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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tnfsf11Tumor necrosis factor ligand superfamily member. (318 aa)    
Predicted Functional Partners:
Tnfrsf11a
Tumor necrosis factor receptor superfamily member 11A.
    
 0.998
Tnfrsf11b
Tumor necrosis factor receptor superfamily member 11B.
    
 0.997
Cd40
Tumor necrosis factor receptor superfamily member 5 isoform X2.
   
 0.895
Tnfrsf14
Tumor necrosis factor receptor superfamily member 14 isoform X2.
   
 0.883
Ltbr
Tumor necrosis factor receptor superfamily member 3.
    
 0.879
Tnfrsf18
Tumor necrosis factor receptor superfamily member 18 isoform X3.
    
 0.879
Tnfsf13b
Tumor necrosis factor ligand superfamily member 13B isoform X2; Belongs to the tumor necrosis factor family.
   
 0.815
Traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
     
 0.772
LOC101830940
Tumor necrosis factor ligand superfamily member 12 isoform X2; Belongs to the tumor necrosis factor family.
     
 0.756
Tnfrsf1b
Tumor necrosis factor receptor superfamily member 1B isoform X2.
   
 
 0.726
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.