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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sema3asemaphorin-3A; Belongs to the semaphorin family. (772 aa)    
Predicted Functional Partners:
Nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.997
LOC101839175
plexin-A4.
    
 0.986
Plxna2
plexin-A2.
    
 0.979
Plxna1
plexin-A1.
    
 0.923
Plxna3
plexin-A3 isoform X1.
    
 0.909
Plxnd1
plexin-D1.
    
 0.859
Plxnb1
plexin-B1 isoform X2.
    
 0.836
Crmp1
Dihydropyrimidinase-related protein 1 isoform X1.
     
 0.806
Mst1r
Macrophage-stimulating protein receptor isoform X2.
    
 0.777
Met
Hepatocyte growth factor receptor.
    
 0.776
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.