STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoxa11Homeobox protein Hox-A11. (312 aa)    
Predicted Functional Partners:
Hoxa10
Homeobox protein Hox-A10 isoform X1.
   
  
0.535
Pax2
Paired box protein Pax-2 isoform X3.
    
 
 0.524
Hoxc6
Homeobox protein Hox-C6.
   
 
0.503
Pbx4
pre-B-cell leukemia transcription factor 4 isoform X5.
    
 
 0.487
Pbx2
pre-B-cell leukemia transcription factor 2.
    
 
 0.487
ENSMAUP00000015922
annotation not available
    
 
 0.487
ENSMAUP00000018639
annotation not available
    
 
 0.487
Pbx1
pre-B-cell leukemia transcription factor 1 isoform X1.
    
 
 0.487
Hoxc4
Homeobox protein Hox-C4.
   
 
0.483
Hoxa7
Homeobox protein Hox-A7 isoform X1.
   
 
0.469
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.