Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Fam20bGlycosaminoglycan xylosylkinase. (409 aa)    
Predicted Functional Partners:
Dcn
Decorin; May affect the rate of fibrils formation.
    
 0.908
Fam20c
Extracellular serine/threonine protein kinase FAM20C.
    
  0.868
Pxylp1
2-phosphoxylose phosphatase 1; Belongs to the histidine acid phosphatase family.
      
 0.841
Asphd2
Aspartate beta-hydroxylase domain-containing protein 2.
    
   0.782
Wdr49
WD repeat-containing protein 49.
   
 0.762
LOC101830097
Calcium-activated chloride channel regulator 4A.
   
 
  0.753
Clca3b
Calcium-activated chloride channel regulator family member 3-like.
   
 
  0.753
LOC101830628
Epithelial chloride channel protein-like.
   
 
  0.753
Clca1
Calcium-activated chloride channel regulator 1.
   
 
  0.753
Golph3
Golgi phosphoprotein 3 isoform X1.
    
   0.752
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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