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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Znf394Zinc finger protein 394. (505 aa)    
Predicted Functional Partners:
Zscan20
Zinc finger and SCAN domain-containing protein 20 isoform X1.
  
 
  
0.665
Gtf3c3
General transcription factor 3C polypeptide 3.
    
 0.603
Zscan29
Zinc finger and SCAN domain-containing protein 29 isoform X1.
    
  
0.602
Usp19
Ubiquitin carboxyl-terminal hydrolase 19.
      
 0.565
Znf397
Zinc finger protein 397.
  
 
  
0.555
Zscan22
Zinc finger and SCAN domain containing 22.
  
 
  
0.555
Sufu
Suppressor of fused homolog; Negative regulator in the hedgehog signaling pathway. Down- regulates GLI1-mediated transactivation of target genes. Part of a corepressor complex that acts on DNA-bound GLI1. May also act by linking GLI1 to BTRC and thereby targeting GLI1 to degradation by the proteasome. Sequesters GLI1, GLI2 and GLI3 in the cytoplasm, this effect is overcome by binding of STK36 to both SUFU and a GLI protein. Negative regulator of beta-catenin signaling. Regulates the formation of either the repressor form (GLI3R) or the activator form (GLI3A) of the full-length form of [...]
    
  0.542
Lamtor2
Ragulator complex protein LAMTOR2 isoform X1.
    
  0.531
Mrps33
28S ribosomal protein S33, mitochondrial.
    
 0.530
Mrps10
28S ribosomal protein S10, mitochondrial isoform X1.
    
  0.529
Your Current Organism:
Mesocricetus auratus
NCBI taxonomy Id: 10036
Other names: Golden hamsters, M. auratus, Syrian golden hamster, Syrian golden hamsters, Syrian hamster, Syrian hamsters, golden hamster
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